Research Catalog

Title

Structural bioinformatics / edited by Philip E. Bourne, Helge Weissig.

Publication

New York : Wiley, [2003], ©2003.

Items in the Library & Off-site

Holdings

Details

Additional Authors

• Bourne, Philip E
• Weissig, Helge

Series Statement

Methods of biochemical analysis ; v. 44

Uniform Title

Methods of biochemical analysis ; v. 44.

Subject

• Macromolecules > Structure > Mathematical models
• Macromolecules > Structure > Computer simulation
• Bioinformatics

Bibliography (note)

• Includes bibliographical references and index.

Contents

• Sect. I. Introduction -- 1. Defining Bioinformatics and Structural Bioinformatics / Russ B. Altman and Jonathan M. Dugan -- 2. Fundamentals of Protein Structure / Eric D. Scheeff and J. Lynn Fink -- 3. Fundamentals of DNA and RNA Structure / Stephen Neidle, Bohdan Schneider and Helen M. Berman -- 4. Computational Aspects of High-Throughput Crystallographic Macromolecular Structure Determination / Paul D. Adams, Ralf W. Grosse-Kunstleve and Axel T. Brunger -- 5. Macromolecular Structure Determination by NMR Spectroscopy / John L. Markley, Eldon L. Ulrich, William M. Westler and Brian F. Volkman -- 6. Electron Microscopy / Niels Volkmann and Dorit Hanein -- 7. Molecular Visualization / John Tate -- Sect. II. Data Representation and Databases -- 8. The PDB Format, mmCIF Formats, and Other Data Formats / John D. Westbrook and P. M. D. Fitzgerald -- 9. The Protein Data Bank / The PDB Team --
• 10. The Nucleic Acid Database / Helen M. Berman, John Westbrook, Zukang Feng, Lisa Iype, Bohdan Schneider and Christine Zardecki -- 11. Other Structure-Based Databases / Helge Weissig and Philip E. Bourne -- Sect. III. Comparative Features -- 12. Protein Structure Evolution and the Scop Database / Boojala V. B. Reddy and Philip E. Bourne -- 13. The Cath Domain Structure Database / C. A. Orengo, F. M. G. Pearl and J. M. Thornton -- 14. Structural Quality Assurance / Roman A. Laskowski -- 15. All-Atom Contacts: A New Approach to Structure Validation / Jane S. Richardson -- 16. Structure Comparison and Alignment / Philip E. Bourne and Ilya N. Shindyalov -- Sect. IV. Structure and Functional Assignment -- 17. Secondary Structure Assignment / Claus A. F. Andersen and Burkhard Rost -- 18. Identifying Structural Domains in Proteins / Lorenz Wernisch and Shoshana J. Wodak --
• 19. Inferring Protein Function from Structure / Gail J. Bartlett, Annabel E. Todd and Janet M. Thornton -- Sect. V. Protein Interactions -- 20. Prediction of Protein - Protein Interactions from Evolutionary Information / Alfonso Valencia and Florencio Pazos -- 21. Electrostatic Interactions / Nathan A. Baker and J. Andrew McCammon -- Sect. VI. Proteins as Drug Targets -- 22. Principles and Methods of Docking and Ligand Design / J. Krumrine, F. Raubacher, N. Brooijmans and I. Kuntz -- 23. Structural Bioinformatics in Drug Discovery / Eric B. Fauman, Andrew L. Hopkins and Colin R. Groom -- Sect. VII. Structure Prediction -- 24. CASP and CAFASP Experiments and their Findings / Philip E. Bourne -- 25. Homology Modeling / Elmar Krieger, Sander B. Nabuurs and Gert Vriend -- 26. Fold Recognition Methods / Adam Godzik -- 27. AB Initio Methods / Dylan Chivian, Timothy Robertson, Richard Bonneau and David Baker --
• 28. Prediction in 1D: Secondary Structure, Membrane Helices, and Accessibility / Burkhard Rost -- Sect. VIII. The Future -- 29. Structure Genomics / Stephen K. Burley and Jeffrey B. Bonanno.

ISBN

• 0471202002 (cloth : alk. paper)
• 0471201995

LCCN

2002011156

OCLC

• ocm50199108
• SCSB-4332827

Owning Institutions

Columbia University Libraries